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Cells are lysed in a urea-containing buffer, cellular proteins are digested by proteases, and the resulting peptides are purified by reversed-phase solid-phase extraction. Peptides are then subjected to immunoaffinity purification using a PTMScan® Motif Antibody conjugated to protein A agarose beads. Unbound peptides are removed through washing, and the captured PTM-containing peptides are eluted with dilute acid. Reversed-phase purification is performed on microtips to desalt and separate peptides from antibody prior to concentrating the enriched peptides for LC-MS/MS analysis. CST recommends the use of PTMScan® IAP Buffer #9993 included in the kit.


参考图片
Motif analysis was done using all tyrosine phosphopeptides generated from a PhosphoScan® experiment of mouse brain and mouse liver tryptic peptides using PTMScan® Phospho-Tyrosine Motif (Y*) (P-Tyr-1000) Immunoaffinity Beads. The Motif Logo, drawn from 1178 nonredundant sites, shows the amino acid distributions around the sites recognized by Phospho-Tyrosine (P-Tyr-1000) Rabbit mAb #8954. The motif logo shows that this antibody is a general phospho-tyrosine antibody and does not have amino acid preferences at other positions.
利用所有的酪氨酸磷酸化多肽进行Motif分析,多肽来自于PhosphoScan®实验中使用PTMScan® Phospho-Tyrosine Motif (Y*) (P-Tyr-1000) Immunoaffinity Beads沉淀到的小鼠大脑和小鼠肺胰蛋白酶消化的多肽。 这个Motif Logo,从1178个低丰度位点中获得,显示了被Phospho-Tyrosine (P-Tyr-1000) Rabbit mAb #8954识别位点周围的氨基酸分布。该Logo显示,该抗体是一个总的磷酸化酪氨酸抗体,对于其他位点没有氨基酸倾向性。
Representative motif analysis of 2362 phospho-tyrosine tryptic peptides generated from a PhosphoScan® experiment of Jurkat cells treated with Calyculin A #9902 and pervanadate using PTMScan® Phospho-Tyrosine Motif (Y*) (P-Tyr-1000) Immunoaffinity Beads. Motif logo was generated using the PhosphoSitePlus® Logo Generator and reflects relative frequency of residues in each position. For more information, please visit PhosphoSitePlus® at www.phosphosite.org.
有代表性的2362种酪氨酸磷酸化胰蛋白酶消化的多肽进行的Motif分析,这些多肽来自于PhosphoScan®实验中使用PTMScan® Phospho-Tyrosine Motif (Y*) (P-Tyr-1000) Immunoaffinity Beads沉淀到的JurKat细胞。Motif Logo使用PhosphoSitePlus® Logo Generator生成,反映了每个位置上的残基相对频率。更多信息,请访问PhosphoSitePlus® at www.phosphosite.org.